| Pos. | No. | Rider | Type | Time | Delay | Gap | Lap | Team | ||||
| 1 | 4 | Kazuma Kobayashi | CBR250R | 2'28.169 | 116.66km/h | 6/8 | M Garage & Necessaire Plan | |||||
| 2 | 73 | Takuro Ebinuma | CBR250R | 2'28.336 | 0.167 | 0.167 | 7/8 | TEAM K Garage | ||||
| 3 | 17 | Masato Yanai | CBR250R | 2'28.689 | 0.520 | 0.353 | 6/8 | WiN-RF & Nakamura Engine & Takahara Dental | ||||
| 4 | 46 | Fumiyasu Watanabe | CBR250R | 2'28.903 | 0.734 | 0.214 | 7/8 | Sakura Acupuncture Clinic Team Watanabe | ||||
| 5 | 22 | Katsuhiko Hagiwara | CBR250R | 2'29.105 | 0.936 | 0.202 | 6/8 | Garage Hagiwara | ||||
| 6 | 51 | Naoki Negishi | CBR250R | 2'29.212 | 1.043 | 0.107 | 5/8 | racing ride sports | ||||
| 7 | 27 | Koji Akabane | CBR250R | 2'29.777 | 1.608 | 0.565 | 6/8 | 802-SPEED | ||||
| 8 | 68 | Akira Miyagawa | CBR250R | 2'30.339 | 2.170 | 0.562 | 5/8 | Fire Garage & RISE | ||||
| 9 | 67 | Akira Sato | CBR250R | 2'30.418 | 2.249 | 0.079 | 7/8 | Achiever Jr & Rokunana | ||||
| 10 | 2 | Makiko Susumu | CBR250R | 2'30.454 | 2.285 | 0.036 | 6/8 | H-TECH | ||||
| 11 | 12 | Takeshi Hoshino | CBR250R | 2'30.514 | 2.345 | 0.060 | 5/7 | 802-SPEED | ||||
| 12 | 91 | Hidenori Matsumoto | CBR250R | 2'30.518 | 2.349 | 0.004 | 7/8 | WIN-RF Highland Dental Tick | ||||
| 13 | 92 | Yasuo Motonaga | CBR250R | 2'30.572 | 2.403 | 0.054 | 8/8 | Wind Supply | ||||
| 14 | 76 | Keisuke Hamada | CBR250R | 2'30.861 | 2.692 | 0.289 | 8/8 | Wing Yoshii RC | ||||
| 15 | 43 | Tomoyuki Taguchi | CBR250R | 2'30.914 | 2.745 | 0.053 | 3/8 | nekomata Racing | ||||
| 16 | 99 | Daichi Kawamura | CBR250R | 2'31.014 | 2.845 | 0.100 | 6/8 | Sakura Acupuncture Clinic Team Watanabe | ||||
| 17 | 94 | Keita Iino | CBR250R | 2'31.300 | 3.131 | 0.286 | 5/8 | YJKR Takasaki@017 | ||||
| 18 | 52 | Kensuke Sasaki | CBR250R | 2'31.414 | 3.245 | 0.114 | 6/8 | Achiever | ||||
| 19 | 78 | Gakuto Shimada | CBR250R | 2'31.476 | 3.307 | 0.062 | 8/8 | T-Labo Channel Racing | ||||
| 20 | 19 | Joukyu Honma | CBR250R | 2'31.884 | 3.715 | 0.408 | 5/8 | AZABU RACING with M GARAGE | ||||
| 21 | 10 | Takayuki Iguchi | CBR250R | 2'32.054 | 3.885 | 0.170 | 7/8 | Fire Garage | ||||
| 22 | 33 | Go Saita | CBR250R | 2'32.115 | 3.946 | 0.061 | 5/6 | Team Kanagawa | ||||
| 23 | 48 | Yoji Hirano | CBR250R | 2'32.441 | 4.272 | 0.326 | 7/8 | Riders Salon Yokohama | ||||
| 24 | 20 | Akira Taki | CBR250R | 2'32.505 | 4.336 | 0.064 | 6/8 | Dandelion Group ss-92 | ||||
| 25 | 15 | Takahiro Yoshida | CBR250R | 2'33.411 | 5.242 | 0.906 | 4/8 | Shirakichi & GRACE x Ura YAC | ||||
| 26 | 47 | Tomoya Hoshi | CBR250R | 2'33.904 | 5.735 | 0.493 | 7/8 | Kesennuma - Team Kattosu | ||||
| 27 | 9 | Takayuki Kimura | CBR250R | 2'34.089 | 5.920 | 0.185 | 7/8 | Moto Paddock Kimura & TOSA | ||||
| 28 | 5 | Shinobu Sanbon | CBR250R | 2'34.608 | 6.439 | 0.519 | 8/8 | 151A Racing Team NTRC | ||||
| 29 | 50 | Kenichi Manabe | CBR250R | 2'34.623 | 6.454 | 0.015 | 6/8 | TEAM B Type | ||||
| 30 | 37 | Yuki Oya | CBR250R | 2'34.711 | 6.542 | 0.088 | 3/6 | Honda Koyo Association Dream Racing | ||||
| 31 | 36 | Masaki Serizawa | CBR250R | 2'34.761 | 6.592 | 0.050 | 8/8 | MATE-A@WITH KEY | ||||
| 32 | 7 | Kei Yamada | CBR250R | 2'35.759 | 7.590 | 0.998 | 6/7 | AZABU RACING with M GARAGE | ||||
| 33 | 86 | Takashi Tezuka | CBR250R | 2'35.868 | 7.699 | 0.109 | 4/8 | Fire Garage | ||||
| 34 | 56 | Daisuke Oki | CBR250R | 2'36.869 | 8.700 | 1.001 | 5/8 | Achiever | ||||
| 35 | 62 | Hiroyuki Akiyoshi | CBR250R | 2'36.899 | 8.730 | 0.030 | 5/7 | Mio-K7 | ||||
| 36 | 24 | Atsushi Ikeda | CBR250R | 2'37.258 | 9.089 | 0.359 | 6/8 | Honda Koyo Association Dream R | ||||
| Qualified vehicles: | ||||||||||||
| 8 | Hitoshi Katsuya | CBR250R | Did not start | Kenyuukai Tochigi PG Racing | ||||||||
| 13 | Shuji Ogawa | CBR250R | Did not start | ARC + Resurrection | ||||||||
| 63 | Yoshinori Ozeki | CBR250R | Did not start | S.F.R with 8810R | ||||||||